lynnlangit

Bioinformatics Code Samples

As I’ve started working with cloud big data in the cancer genomics (bioinformatics) vertical, I’ve ‘collected’ my notes, code and work in a GitHub repo.

I have general information, i.e. terms, file types, etc… at the top level of the repo.  Next, I organized tools and libraries (such as Galaxy, Hail, etc…) by folder in the repo.  I’ve included sample code when I’ve had time to test it as well.

Samples and information are presented for either the AWS or the GCP cloud.